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        <title>Dopamine Cells Respond to Predicted Events during Classical Conditioning: Evidence for Eligibility Traces in the Reward-Learning Network</title>
        <author>Wei‐Xing Pan</author>
        <author>Robert Schmidt</author>
        <author>Jeffery R. Wickens</author>
        <author>Brian I. Hyland</author>
      </titleStmt>
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        <bibl>
          <title>Dopamine Cells Respond to Predicted Events during Classical Conditioning: Evidence for Eligibility Traces in the Reward-Learning Network</title>
          <date>2005</date>
          <publisher>Journal of Neuroscience</publisher>
          <idno type="DOI">10.1523/jneurosci.1478-05.2005</idno>
          
          <idno type="record">pan2005-dopamine-cells-respond-to-predicte</idno>
          <note type="staged-file">pan2005-dopamine-cells-respond-to-predicte.txt, the project's staged copy</note>
          <note type="text-sha1">e5954dac87e4c29baf955d55da69c4f257b7b70d</note>
          <note type="rights">open-access</note>
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    <spanGrp type="tags">
      <span xml:id="t0" type="object_of_study" ana="#object_of_study" resp="#paper">
        <label>how the dopamine response moves from reward to predictive cue during learning, and whether the temporal difference algorithm can produce that time course</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t1" type="research_question" ana="#research_question" resp="#paper">
        <label>whether dopamine cells show the stepwise latency migration that published TD models predict, and if not, which parameter settings would reproduce what they do show</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t2" type="contribution" ana="#contribution" resp="#paper">
        <label>shows cue and reward responses coexist rather than trading off, then finds the pattern is reproduced only by long eligibility traces and a low learning rate - turning physiology into a constraint on the algorithm&#x27;s parameters</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t3" type="claim_type" ana="#claim_type" resp="#paper">
        <label>mechanism</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t4" type="phenomenon" ana="#phenomenon" resp="#paper">
        <label>dopamine reward-prediction-error signalling during classical conditioning</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t5" type="method" ana="#method" resp="#paper">
        <label>electrophysiology</label>
        <term>electrophysiology</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t6" type="mechanisms" ana="#mechanisms[0]" resp="#tagger">
        <label>mechanisms</label>
        <term>A long-lasting eligibility trace keeps the weights of an earlier sensory signal open to modification for many time steps, so the reward-driven prediction error can be assigned back to the cue in one step instead of migrating one time step per trial</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t7" type="mechanisms" ana="#mechanisms[1]" resp="#tagger">
        <label>mechanisms</label>
        <term>A very low learning rate combined with a high eligibility-trace decay makes each trial change the weights only slightly, so responses to the cue and to the predicted reward coexist for a prolonged period before the reward response is suppressed</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t8" type="mechanisms" ana="#mechanisms[2]" resp="#tagger">
        <label>mechanisms</label>
        <term>Sustained firing in reverberating circuits, or biochemical processes at the synapse, could hold the seconds-long eligibility trace the model requires</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t9" type="mechanisms" ana="#mechanisms[3]" resp="#tagger" cert="1.0">
        <label>an eligibility trace keeps earlier time steps modifiable, so a cue several steps back can be updated in one trial instead of waiting for the error to migrate</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t10" type="mechanisms" ana="#mechanisms[4]" resp="#tagger" cert="1.0">
        <label>with a low learning rate each trial moves the weights only slightly, which is what lets cue and reward responses coexist for hundreds of trials</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t11" type="mechanisms" ana="#mechanisms[5]" resp="#tagger" cert="1.0">
        <label>under TD(0) the error must arrive one step earlier per trial, so reaching a cue k steps back takes at least k trials</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t12" type="mechanisms" ana="#mechanisms[6]" resp="#tagger" cert="0.6">
        <label>candidate substrates for a seconds-long trace are reverberating circuits and synaptic biochemistry</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t13" type="mechanisms" ana="#mechanisms[7]" resp="#tagger" cert="0.6">
        <label>long traces with slow learning is the combination machine learning already found to give early but stable learning, which may be why biology uses it</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t14" type="limitations" ana="#limitations[0]" resp="#tagger">
        <label>The fitted parameter values are not claimed to be fixed neural constants, since a different model structure could yield different best-fitting values.</label>
        <note>what this limits: the fitted parameter values: OUR RESULTS SHOULD NOT BE UNDERSTOOD AS PROVIDING EXPLICIT FIXED VALUES FOR NEURAL TD LEARNING PARAMETERS, BECAUSE THE SPECIFIC VALUES ... MAY BE DIFFERENT IF DETAILS OF THE MODEL STRUCTURE WERE CHANGED</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t15" type="limitations" ana="#limitations[1]" resp="#tagger">
        <label>The stimulus representation assumed by the model (serial compound) is not known to be how the brain represents stimuli for reward learning.</label>
        <note>what this limits: the timing predictions in particular: IT IS NOT KNOWN HOW SENSORY STIMULI ARE REPRESENTED IN THE BRAIN FOR REWARD LEARNING</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t16" type="limitations" ana="#limitations[2]" resp="#tagger" cert="1.0">
        <label>the paper refuses the strong reading of its own result: these are not fixed values for neural parameters, because a different model structure would shift them</label>
        <note>what this limits: the same scope as limitations[0] - the values are a property of this model structure</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t17" type="limitations" ana="#limitations[3]" resp="#tagger" cert="1.0">
        <label>how the brain represents stimuli in time is unknown; the serial compound representation is a convention inherited from earlier models</label>
        <note>what this limits: the same scope as limitations[1], with the convention named: WE FOLLOWED MANY PREVIOUS STUDIES IN USING A SERIAL COMPOUND REPRESENTATION OF CONDITIONED STIMULI</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t18" type="limitations" ana="#limitations[4]" resp="#tagger" cert="1.0">
        <label>the animals had already had hundreds of solenoid-reward pairings before recording, so the click was not a neutral event at the start of conditioning</label>
        <note>what this limits: any reading of the click as a neutral cue: ANIMALS WERE THEREFORE EXPOSED TO HUNDREDS OF SOLENOID-REWARD PAIRINGS BY THE TIME THE RECORDINGS WERE MADE</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t19" type="limitations" ana="#limitations[5]" resp="#tagger" cert="1.0">
        <label>the negative prediction error signal is small and hard to measure against an already low baseline rate</label>
        <note>what this limits: the negative prediction-error signal: THE AMPLITUDE OF INHIBITIONS WAS SMALL, CONSISTENT WITH THE FACT THAT INHIBITORY RESPONSES CAN BE DIFFICULT TO DETECT AND QUANTIFY IN NEURONS THAT ALREADY HAVE A LOW BASELINE RATE</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t20" type="limitations" ana="#limitations[6]" resp="#tagger" cert="1.0">
        <label>21 of 45 electrophysiologically plausible cells failed the pharmacological test and were discarded</label>
        <note>what this limits: what a &#x27;dopamine neuron&#x27; means here, and in every study that skips the drug test: FROM 45 NEURONS THAT WERE POSSIBLY DOPAMINERGIC ON ELECTROPHYSIOLOGICAL CRITERIA, 24 ... WERE CONFIRMED DA NEURONS BASED ON HAVING A CLEAR INHIBITORY RESPONSE TO DOPAMINE AGONIST DRUGS</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t21" type="transfers" ana="#transfers[0]" resp="#tagger">
        <label>The temporal difference algorithm and its prediction-error signal, taken from machine learning, are used as the model of midbrain dopamine cell activity.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t22" type="transfers" ana="#transfers[1]" resp="#tagger" cert="1.0">
        <label>the temporal difference algorithm, imported as a candidate account of what dopamine cells compute</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t23" type="transfers" ana="#transfers[2]" resp="#tagger" cert="1.0">
        <label>the century-old requirement that some trace of the cue survive until the reward arrives, here identified with the eligibility trace</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t24" type="transfers" ana="#transfers[3]" resp="#tagger" cert="0.9">
        <label>the known trade-off that high lambda with low alpha buys stable early learning, used here as an adaptive argument</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t25" type="controls" ana="#controls[0]" resp="#tagger" cert="0.85">
        <label>electrode track positions confirmed histologically after the experiments were completed</label>
        <note>eliminates: attributing the responses to dopamine cells that were not where the recordings were thought to be - the confirmation comes after, from the tissue, not from the coordinates · outcome (stated by the tagger, no quotation): held</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t26" type="senses" ana="#senses[0]" resp="#tagger" cert="1.0">
        <label>presumed DA cells are a doubly filtered category: rate below 10 Hz and spike at least 1 ms, THEN more than 50% inhibition by a dopamine agonist. Cell identity is pharmacological here, not genetic or anatomical</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t27" type="senses" ana="#senses[1]" resp="#tagger" cert="1.0">
        <label>TD(0), TD(1) and TD(lambda) are three different models, not one - the value of lambda changes which weights an error can touch, and the published DA models were TD(0)</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t28" type="senses" ana="#senses[2]" resp="#tagger" cert="1.0">
        <label>prediction error here is the scalar difference between actual reward and the temporal difference of successive predictions, with the NEGATIVE side deliberately clipped to match dopamine cells&#x27; floor</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t29" type="senses" ana="#senses[3]" resp="#tagger" cert="0.9">
        <label>early and late training are defined by block count - 6 or fewer against 10 or more - and the paper&#x27;s central result holds only early</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t30" type="senses" ana="#senses[4]" resp="#tagger" cert="1.0">
        <label>the recorded population pools substantia nigra pars compacta, ventral tegmental area and supramammillary nucleus, justified by a null on regional differences</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t31" type="alternatives" ana="#alternatives.claim_type" resp="#tagger">
        <label>claim_type: mechanism</label>
        <note>a second reading reaching the same value. Recorded: mechanism — note: a second reading reaching the same value from a different sentence. Not applied - a person decides.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t32" type="alternatives" ana="#alternatives.method" resp="#tagger">
        <label>method: extracellular single-unit recording from pharmacologically identified midbrain dopamine cells during first acquisition, paired with a systematic sweep of the TD algorithm&#x27;s parameter space</label>
        <note>a second reading DIFFERING from the recorded value. Recorded: electrophysiology — note: a second reading, verbatim-verified, disagreeing with the value on the record. Not applied - a person decides.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t33" type="alternatives" ana="#alternatives.phenomenon" resp="#tagger">
        <label>phenomenon: the shift of dopamine cell firing from unexpected reward to the cue that predicts it</label>
        <note>a second reading DIFFERING from the recorded value. Recorded: dopamine reward-prediction-error signalling during classical conditioning — note: a second reading, verbatim-verified, disagreeing with the value on the record. Not applied - a person decides.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t34" type="claim_relations" ana="#claim_relations[0]" resp="#tagger">
        <label>builds-on → Montague et al. (1996) temporal-difference model of dopamine activity</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t35" type="claim_relations" ana="#claim_relations[1]" resp="#tagger">
        <label>contradicts → previous TD models predicting a gradual stepwise latency shift (Montague et al., 1996; Schultz et al., 1997)</label>
        <note>differs in: the time course of the latency shift: previous TD models PREDICT A GRADUAL STEPWISE SHIFT IN LATENCY WITH RESPONSES TO REWARDS LOST BEFORE RESPONSES DEVELOP TO THE CONDITIONED CUE</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t36" type="claim_relations" ana="#claim_relations[2]" resp="#tagger">
        <label>extends → Miller et al., 1981; Kosobud et al., 1994; Kiyatkin and Rebec, 2001; Hyland et al., 2002 (rat DA cell responses to reward-predicting cues)</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t37" type="claim_relations" ana="#claim_relations[3]" resp="#tagger" cert="1.0">
        <label>contradicts → the stepwise latency migration predicted by TD(0) models of dopamine activity</label>
        <note>differs in: the latency profile of the new response: NEW CONDITIONED RESPONSES MADE THEIR FIRST APPEARANCE AT A CONSTANT, SHORT LATENCY AFTER PREDICTIVE CUES, and DEVELOPED RAPIDLY, WITHIN A FEW TRIALS - not the gradual migration the models expect</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t38" type="claim_relations" ana="#claim_relations[4]" resp="#tagger" cert="1.0">
        <label>contradicts → the prediction that a redundant intermediate cue draws no response</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t39" type="claim_relations" ana="#claim_relations[5]" resp="#tagger" cert="1.0">
        <label>contradicts → the prediction that reward responses vanish before cue responses appear</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t40" type="claim_relations" ana="#claim_relations[6]" resp="#tagger" cert="1.0">
        <label>reconciles → the temporal difference framework with the recorded time course, by relocating the disagreement to parameter choice</label>
        <note>differs in: the model&#x27;s free parameters: THESE APPARENT DISPARITIES BETWEEN TD MODEL PREDICTION ERRORS AND DA CELL ACTIVITY ARE ATTRIBUTABLE TO THE PARTICULAR CHOICE OF PARAMETERS USED IN THE MODEL - the settings for ALPHA and LAMBDA, not the framework</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t41" type="claim_relations" ana="#claim_relations[7]" resp="#tagger" cert="1.0">
        <label>critiques → published primate datasets, which on re-inspection never supported gradual migration either</label>
        <note>differs in: gradual migration against simultaneous responding, and the stage of learning: the existing primate data PROVIDES NO SUPPORT FOR THE GRADUAL MIGRATION OF A RESPONSE DURING LEARNING AND SUGGESTS THAT DA CELLS SHOW SIMULTANEOUS RESPONDING TO BOTH CUE AND REWARD, AT LEAST EARLY IN LEARNING</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t42" type="claim_relations" ana="#claim_relations[8]" resp="#tagger" cert="0.9">
        <label>confirms → earlier reports that reward responses are diminished in highly trained animals</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t43" type="claim_relations" ana="#claim_relations[9]" resp="#tagger" cert="1.0">
        <label>extends → rat studies showing dopamine responses to reward-predicting cues, by showing they arise during acquisition</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t44" type="concept_edges" ana="#concept_edges[0]" resp="#tagger" cert="1.0">
        <label>prediction error —operationalised-as→ DA cells</label>
        <term>prediction error</term>
        <term>DA cells</term>
        <note>strength of the relation: 1 · note: the identification is asymmetric by construction: firing can rise to 100 Hz but only fall to zero from a 5 Hz baseline
Audit 2026-09-28: DOUBTFUL - read against its full span and kept, but the span says DA cells&#x27; baseline spiking can be equated to zero prediction error; operationalised-as is loose.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t45" type="concept_edges" ana="#concept_edges[2]" resp="#tagger" cert="1.0">
        <label>TD(0) —is-a→ temporal difference</label>
        <term>TD(0)</term>
        <term>temporal difference</term>
        <note>strength of the relation: 1
Audit 2026-09-28: DOUBTFUL - read against its full span and kept, but the span writes &#x27;TD(0) model&#x27;; &#x27;temporal difference&#x27; is an abbreviation variant.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t46" type="concept_edges" ana="#concept_edges[3]" resp="#tagger" cert="1.0">
        <label>TD(1) —is-a→ temporal difference</label>
        <term>TD(1)</term>
        <term>temporal difference</term>
        <note>strength of the relation: 1
Audit 2026-09-28: DOUBTFUL - read against its full span and kept, but the span writes &#x27;TD(1) model&#x27;; &#x27;temporal difference&#x27; is an abbreviation variant.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t47" type="concept_edges" ana="#concept_edges[5]" resp="#tagger" cert="1.0">
        <label>apomorphine —operationalised-as→ DA cells</label>
        <term>apomorphine</term>
        <term>DA cells</term>
        <note>strength of the relation: 1 · note: direction is test-to-category: more than 50% inhibition by the agonist is what makes a recorded cell count as dopaminergic
Audit 2026-09-28: DOUBTFUL - read against its span and kept, but apomorphine inhibition was an inclusion criterion for DA cells; operationalised-as is loose.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t48" type="concept_edges" ana="#concept_edges[8]" resp="#tagger" cert="1.0">
        <label>serial compound —operationalised-as→ state vector</label>
        <term>serial compound</term>
        <term>state vector</term>
        <note>strength of the relation: 1</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t49" type="concept_edges" ana="#concept_edges[9]" resp="#tagger" cert="0.9">
        <label>omission —operationalised-as→ prediction error</label>
        <term>omission</term>
        <term>prediction error</term>
        <note>strength of the relation: 0.8 · note: the negative side of the signal is measured by withholding what was predicted
Audit 2026-09-28: DOUBTFUL - read against its span and kept, but responses to cue omission were analysed; operationalised-as &#x27;prediction error&#x27; is interpretive.</note>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t50" type="content_tags" ana="#content_tags.statistics[0]" resp="#tagger">
        <label>t-test</label>
        <term>t-test</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t51" type="content_tags" ana="#content_tags.statistics[1]" resp="#tagger">
        <label>standard deviation</label>
        <term>standard deviation</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t52" type="content_tags" ana="#content_tags.statistics[2]" resp="#tagger">
        <label>standard error of the mean</label>
        <term>standard error of the mean</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t53" type="content_tags" ana="#content_tags.statistics[3]" resp="#tagger">
        <label>standard deviation threshold criterion</label>
        <term>standard deviation threshold criterion</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t54" type="content_tags" ana="#content_tags.statistics[4]" resp="#tagger">
        <label>histogram</label>
        <term>histogram</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t55" type="content_tags" ana="#content_tags.statistics[5]" resp="#tagger" cert="1.0">
        <label>paired t test</label>
        <term>paired t test</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t56" type="content_tags" ana="#content_tags.statistics[6]" resp="#tagger" cert="0.8">
        <label>modulation index</label>
        <term>modulation index</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t57" type="content_tags" ana="#content_tags.statistics[7]" resp="#tagger" cert="0.9">
        <label>SD</label>
        <term>SD</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t58" type="content_tags" ana="#content_tags.findings[0]" resp="#tagger">
        <label>Dopamine cells kept responding to reward long after they developed responses to the predictive cue.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t59" type="content_tags" ana="#content_tags.findings[1]" resp="#tagger">
        <label>New conditioned responses appeared straight away at their final short latency after the cue, with no gradual backward drift of latency from reward to cue.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t60" type="content_tags" ana="#content_tags.findings[2]" resp="#tagger">
        <label>Every cell trained with two cues in sequence responded clearly to the second, seemingly redundant cue, and that response persisted for the whole experiment.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t61" type="content_tags" ana="#content_tags.findings[3]" resp="#tagger">
        <label>Cells recorded after many sessions of cue-reward pairing no longer responded to a predictable reward, unlike the cells recorded early in training.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t62" type="content_tags" ana="#content_tags.findings[4]" resp="#tagger">
        <label>Acquiring a cue response and losing the reward response run on different time courses rather than being two sides of one shift.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t63" type="content_tags" ana="#content_tags.findings[5]" resp="#tagger">
        <label>Omitting an expected reward significantly reduced firing rate.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t64" type="content_tags" ana="#content_tags.findings[6]" resp="#tagger">
        <label>Omitting the second cue restored reward responses to the level seen with random reward.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t65" type="content_tags" ana="#content_tags.findings[7]" resp="#tagger">
        <label>With the chosen parameter values, the TD model&#x27;s prediction error reproduced key elements of the recorded dopamine pattern.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t66" type="content_tags" ana="#content_tags.findings[8]" resp="#tagger">
        <label>A high eligibility-trace decay parameter was the one setting that let the model learn cue significance without stepwise trial-by-trial migration of the response from reward to cue.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t67" type="content_tags" ana="#content_tags.findings[9]" resp="#tagger">
        <label>Once the eligibility-trace decay fell below about 0.6, stepwise migration of the prediction error reappeared no matter what learning rate was used.</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t68" type="content_tags" ana="#content_tags.findings[10]" resp="#tagger" cert="1.0">
        <label>conditioned responses appeared at their final short latency within a few trials, with no gradual migration</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t69" type="content_tags" ana="#content_tags.findings[11]" resp="#tagger" cert="1.0">
        <label>the redundant intermediate cue drew a clear response in every two-cue cell, which persisted</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t70" type="content_tags" ana="#content_tags.findings[12]" resp="#tagger" cert="1.0">
        <label>responses to predicted reward persisted after cue responses had developed, in every cell recorded early in training</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t71" type="content_tags" ana="#content_tags.findings[13]" resp="#tagger" cert="1.0">
        <label>responses to predicted reward are lost completely only after training beyond what first establishes cue responses, so the two changes have different time courses</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t72" type="content_tags" ana="#content_tags.findings[14]" resp="#tagger" cert="1.0">
        <label>those late-training cells still responded robustly to reward delivered without cues</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t73" type="content_tags" ana="#content_tags.findings[15]" resp="#tagger" cert="1.0">
        <label>omitting the second cue restored the reward response to its uncued level, so the redundant cue was doing predictive work</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t74" type="content_tags" ana="#content_tags.findings[16]" resp="#tagger" cert="1.0">
        <label>TD with eligibility zero and a fast learning rate reproduced the published pattern, with no second-cue response and no overlap</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t75" type="content_tags" ana="#content_tags.findings[17]" resp="#tagger" cert="1.0">
        <label>TD with lambda 0.9 and alpha 0.005 reproduced the recorded pattern, including the coexistence and the intermediate cue response</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t76" type="content_tags" ana="#content_tags.findings[18]" resp="#tagger" cert="1.0">
        <label>lambda below about 0.6 brought stepwise migration back for every value of alpha, making it the critical parameter</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t77" type="content_tags" ana="#content_tags.findings[19]" resp="#tagger" cert="1.0">
        <label>omitted rewards produced a significant firing decrease but omitted cues did not</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t78" type="content_tags" ana="#content_tags.findings[20]" resp="#tagger" cert="1.0">
        <label>CONTROL NULL: no regional difference in response pattern, which is what licensed pooling the three midbrain sites</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t79" type="content_tags" ana="#content_tags.findings[21]" resp="#tagger" cert="1.0">
        <label>BUILT IN, NOT PREDICTED: the model&#x27;s small negative errors follow from the clipping imposed to match dopamine cells&#x27; floor, as the authors state</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t80" type="content_tags" ana="#content_tags.findings[22]" resp="#tagger" cert="1.0">
        <label>re-inspection of published primate datasets found no support for gradual migration there either</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t81" type="content_tags" ana="#content_tags.definitions[0]" resp="#tagger">
        <label>eligibility trace</label>
        <term>eligibility trace</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t82" type="content_tags" ana="#content_tags.definitions[1]" resp="#tagger">
        <label>temporal difference</label>
        <term>temporal difference</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t83" type="content_tags" ana="#content_tags.definitions[3]" resp="#tagger">
        <label>learning rate parameter</label>
        <term>learning rate parameter</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t84" type="content_tags" ana="#content_tags.definitions[6]" resp="#tagger">
        <label>complete serial compound stimulus</label>
        <term>complete serial compound stimulus</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t85" type="content_tags" ana="#content_tags.definitions[7]" resp="#tagger" cert="1.0">
        <label>temporal difference</label>
        <term>temporal difference</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t86" type="content_tags" ana="#content_tags.definitions[8]" resp="#tagger" cert="1.0">
        <label>prediction error</label>
        <term>prediction error</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t87" type="content_tags" ana="#content_tags.definitions[9]" resp="#tagger" cert="1.0">
        <label>eligibility trace</label>
        <term>eligibility trace</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t88" type="content_tags" ana="#content_tags.definitions[10]" resp="#tagger" cert="1.0">
        <label>serial compound</label>
        <term>serial compound</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t89" type="content_tags" ana="#content_tags.definitions[11]" resp="#tagger" cert="1.0">
        <label>modulation index</label>
        <term>modulation index</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t90" type="content_tags" ana="#content_tags.definitions[12]" resp="#tagger" cert="1.0">
        <label>TD(0)</label>
        <term>TD(0)</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t91" type="content_tags" ana="#content_tags.definitions[13]" resp="#tagger">
        <label>TD(1) model</label>
        <term>TD(1) model</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t92" type="content_tags" ana="#content_tags.definitions[14]" resp="#tagger">
        <label>TD(0) model</label>
        <term>TD(0) model</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t93" type="content_tags" ana="#content_tags.variables[1]" resp="#tagger">
        <label>oddball sequences</label>
        <term>oddball sequences</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t94" type="content_tags" ana="#content_tags.variables[2]" resp="#tagger">
        <label>decay parameter</label>
        <term>decay parameter</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t95" type="content_tags" ana="#content_tags.variables[4]" resp="#tagger">
        <label>firing rate</label>
        <term>firing rate</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t96" type="content_tags" ana="#content_tags.variables[5]" resp="#tagger">
        <label>discount factor</label>
        <term>discount factor</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t97" type="content_tags" ana="#content_tags.variables[6]" resp="#tagger">
        <label>intertrial interval</label>
        <term>intertrial interval</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t98" type="content_tags" ana="#content_tags.variables[7]" resp="#tagger">
        <label>control paradigms</label>
        <term>control paradigms</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t99" type="content_tags" ana="#content_tags.variables[9]" resp="#tagger" cert="1.0">
        <label>learning rate</label>
        <term>learning rate</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t100" type="content_tags" ana="#content_tags.variables[10]" resp="#tagger" cert="1.0">
        <label>eligibility trace</label>
        <term>eligibility trace</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t101" type="content_tags" ana="#content_tags.variables[11]" resp="#tagger" cert="1.0">
        <label>latency</label>
        <term>latency</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t102" type="content_tags" ana="#content_tags.variables[12]" resp="#tagger" cert="1.0">
        <label>omission</label>
        <term>omission</term>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t103" type="content_tags" ana="#content_tags.quantities[0]" resp="#tagger">
        <label>24 of 45, from 11 rats — cells that passed pharmacological confirmation as dopamine neurons out of those meeting the electrophysiological criteria</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t104" type="content_tags" ana="#content_tags.quantities[1]" resp="#tagger">
        <label>5.7 ± 3.5 Hz — average baseline firing rate of the confirmed dopamine cells</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t105" type="content_tags" ana="#content_tags.quantities[2]" resp="#tagger">
        <label>8 of 11 — cells tested in which conditioned responses to the cue developed during recording</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t106" type="content_tags" ana="#content_tags.quantities[3]" resp="#tagger">
        <label>74 ± 33 ms; 53 ± 9 ms — latencies of the newly conditioned excitatory and inhibitory responses to the cue</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t107" type="content_tags" ana="#content_tags.quantities[4]" resp="#tagger">
        <label>-0.12 ± 0.17 — average modulation index at the time of an omitted second cue, a nonsignificant departure from baseline</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t108" type="content_tags" ana="#content_tags.quantities[5]" resp="#tagger">
        <label>-0.21 ± 0.20; p &lt; 0.01; n = 11 — average modulation index when an expected reward was omitted, a significant reduction from baseline</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t109" type="content_tags" ana="#content_tags.quantities[6]" resp="#tagger">
        <label>∼0.6 — threshold value of the eligibility-trace decay parameter below which stepwise migration of the prediction error reappears</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t110" type="content_tags" ana="#content_tags.quantities[7]" resp="#tagger">
        <label>-0.05 — ceiling imposed on the model&#x27;s negative prediction error, to match the limited range over which dopamine cells can be inhibited</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t111" type="content_tags" ana="#content_tags.quantities[8]" resp="#tagger" cert="0.9">
        <label>0.9 and 0.005 — the lambda and alpha that reproduced the recorded dopamine pattern</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t112" type="content_tags" ana="#content_tags.quantities[9]" resp="#tagger" cert="1.0">
        <label>about 0.6 — the lambda threshold below which stepwise migration reappears for every alpha</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t113" type="content_tags" ana="#content_tags.quantities[10]" resp="#tagger" cert="1.0">
        <label>-0.05 — the imposed floor on negative prediction error, matching dopamine cells&#x27; limited inhibitory range</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t114" type="content_tags" ana="#content_tags.quantities[11]" resp="#tagger" cert="1.0">
        <label>24 of 45 — electrophysiologically plausible cells that passed the pharmacological identification</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t115" type="content_tags" ana="#content_tags.quantities[12]" resp="#tagger" cert="1.0">
        <label>5.7 Hz, 1.5 ms — mean firing rate and spike duration of the accepted dopamine cells</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t116" type="content_tags" ana="#content_tags.quantities[13]" resp="#tagger" cert="1.0">
        <label>-0.21 vs -0.12 — modulation index for omitted reward (significant) against omitted cue (not)</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
      <span xml:id="t117" type="content_tags" ana="#content_tags.quantities[14]" resp="#tagger" cert="1.0">
        <label>74 ms and 53 ms — latency of the new conditioned excitations and inhibitions</label>
        <note type="quotation-withheld">Quotation withheld because this record is not cleared for redistribution.</note>
      </span>
    </spanGrp>
  </standOff>
  <text>
    <body>
      <p><note type="rights">The full text of this article is not redistributable, so it is
      not included here. The evidence sentences are withheld with it; the tag layer and its
      grounding status remain. The article itself is at https://doi.org/10.1523/jneurosci.1478-05.2005.</note></p>
    </body>
  </text>
</TEI>
