Κωνσταντίνος ΛιάκοςpersName, Patrizia BusatopersName, Dimitrios MoshoupersName, Simon PearsonpersName, Dionysis BochtispersName (2018date). “Machine Learning in Agriculture: A Review.” Sensorstitle·venue.
Object of study — published applications of machine learningterm·dom in agricultural production - crop, livestock, water and soil managementterm·var - and the ML modelsterm·var they used
Research question — which machine learningterm·dom models have been applied to which agricultural problems, and in what proportions
Contribution — a four-way classification of ML applications in agriculture over 40 journal articles, with the model-by-subcategory distribution, prefaced by a plain statement of ML terminology
phenomenon · claim-type · cross-domain-transfer · mechanism · claim-relation · replication-status · limitation — grounded in the full text| phenomenon | sensor-generated agricultural data outrunning the analytical methods available to act on it — “By applying machine learning to sensor data, farm management systems are evolving into real time artificial intelligence enabled programs that provide rich recommendations and insights for farmer decision support and action.” | |
| claim-type | existence — “From the above figures and tables, we show that ML models have been applied in multiple applications for crop management (61%); mostly yield prediction (20%) and disease detection (22%).” | |
| method — evidence | — “The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers.” | |
| object of study — evidence | — “The works analyzed were categorized in (a) crop management, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock management, including applications on animal welfare and livestock production; (c) water management; and (d) soil management.” | |
| research question — evidence | — “In this paper, we present a comprehensive review of research dedicated to applications of machine learning in agricultural production systems.” | |
| contribution — evidence | — “The reviewed articles have been, on a first level, classified in four generic categories; namely, crop management, livestock management, water management, and soil management.” | |
| mechanism | THE LEARNING SIGNAL IS WHAT DIVIDES THE TWO FAMILIES: supervised learning has inputs paired with outputs and builds a mapping; unsupervised has no train/test distinction at all and looks for hidden structure. The difference is in what the data carries, not in the algorithm chosen — “In unsupervised learning, however, there is no distinction between training and test sets with data being unlabeled. The learner processes input data with the goal of discovering hidden patterns.” | mechanisms[0] |
| mechanism | DIMENSIONALITY REDUCTION RUNS BEFORE THE MODEL, IN BOTH FAMILIES, to give a lower-dimensional representation preserving as much information as possible - and it is applied specifically to avoid the effects of dimensionality rather than as a modelling choice — “It is usually performed prior to applying a classification or regression model in order to avoid the effects of dimensionality.” | mechanisms[1] |
| mechanism | CROP APPLICATIONS DOMINATE BECAUSE THEIR DATA NEEDS NO FUSION: ML predictions in crop management can be extracted from images alone, whereas livestock, water and soil work requires combining recorded data sources - so the distribution reflects DATA ASSEMBLY COST rather than the difficulty of the ML — “In contrast, when data recordings are involved, occasionally at the level of big data, the implementations of ML are less in number, mainly because of the increased efforts required for the data analysis task and not for the ML models per se.” | mechanisms[2] |
| mechanism | THE APPROACHES ARE NOT WIRED INTO DECISIONS: every reviewed application is an individual solution not adequately connected with the decision-making process, which is the paper's own account of why the field has not consolidated — “At the moment, all of the approaches regard individual approaches and solutions and are not adequately connected with the decision-making process, as seen in other application domains.” | mechanisms[3] |
| distinguishes-from | ML applications to climate prediction, deliberately excluded from this review on the ground that it is a complete area by itself — “Climate prediction, although very important for agricultural production, has not been included in the presented review, considering the fact that ML applications for climate prediction is a complete area by itself.” | claim_relations[0] |
| sense | feature - THREE NAMES FOR ONE THING, SAID IN ONE SENTENCE: `a set of attributes, also known as features or variables`. The corpus holds `variables` as a content_tags layer and `features` as a concept on other records, and this is the paper that says they are the same object seen from statistics, from machine learning and from experimental design — “Usually, an individual example is described by a set of attributes, also known as features or variables.” | senses[0] |
| sense | supervised / unsupervised - THE DIVIDING LINE IS THE LEARNING SIGNAL, NOT THE ALGORITHM. Supervised means inputs arrive with their outputs and the goal is a rule mapping one to the other; unsupervised means there is NO DISTINCTION BETWEEN TRAINING AND TEST SETS at all, which is a stronger statement than `unlabelled data` and is what makes the two families incomparable on accuracy — “In unsupervised learning, however, there is no distinction between training and test sets with data being unlabeled. The learner processes input data with the goal of discovering hidden patterns.” | senses[1] |
| sense | reinforcement learning - PLACED HERE AS A PARTIAL CASE OF SUPERVISION rather than a third family: inputs partially available, some target outputs missing or given only as feedback to actions in a dynamic environment. Other papers in this corpus treat it as a peer of the other two, and the disagreement is about what the taxonomy is FOR — “In some cases, inputs can be only partially available with some of the target outputs missing or given only as feedback to the actions in a dynamic environment (reinforcement learning).” | senses[2] |
| sense | this paper's `review` - A NARRATIVE REVIEW WITH A SEARCH ENGINE LIST AND NO INCLUSION CRITERIA. Scopus, ScienceDirect and PubMed are named; no keywords, no screening rule and no exclusion count are given, and 40 is reported as a result. Its percentages are therefore descriptive of a corpus assembled by unstated means — “The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers.” | senses[3] |
| control | the scope is bounded and stated: three named search engines, journal papers only, 2004 onward, and climate prediction excluded by declaration — partial — “Finally, all articles presented here regard the period from 2004 up to the present.” — rules out an unbounded reading of the review's percentages - the scope is stated: three search engines, journal papers only, 2004 onward, climate prediction excluded. It does not eliminate selection bias, because no inclusion criteria are given — “The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers.” | controls[0] |
| control | the presentation of learning models is limited to those actually implemented in the reviewed works, rather than a general survey of ML — held — “The presentation of the learning models in ML is limited to the ones that have been implemented in works presented in this review.” — rules out the terminology section being read as a survey of machine learning as a field - it is declared limited to the models actually implemented in the reviewed works — “The presentation of the learning models in ML is limited to the ones that have been implemented in works presented in this review.” | controls[1] |
| weight | attributes —same-as→ features — 0.95 — “Usually, an individual example is described by a set of attributes, also known as features or variables.” | concept_edges[0] |
| weight | supervised learning —distinct-from→ unsupervised learning — 0.95 — “In supervised learning, data are presented with example inputs and the corresponding outputs, and the objective is to construct a general rule that maps inputs to outputs. In some cases, inputs can be only partially available with some of the target outputs missing or given only as feedback to the actions in a dynamic environment (reinforcement learning). In the supervised setting, the acquired expertise (trained model) is used to predict the missing outputs (labels) for the test data. In unsupervised learning, however, there is no distinction between training and test sets with data being unlabeled. The learner processes input data with the goal of discovering hidden patterns.” | concept_edges[1] |
| audit | Dimensionality reduction —operationalised-as→ principal component analysis — Audit 2026-09-28: DOUBTFUL - read against its full span and kept, but the span writes 'DR' and lists PCA as one of the common DR algorithms; operationalised-as is loose. — “Some of the most common DR algorithms are the following: (i) principal component analysis [22], (ii) partial least squares regression [23], and (iii) linear discriminant analysis” | concept_edges[2] |
| weight | Dimensionality reduction —operationalised-as→ principal component analysis — 0.9 — “Some of the most common DR algorithms are the following: (i) principal component analysis [22], (ii) partial least squares regression [23], and (iii) linear discriminant analysis” | concept_edges[2] |
| audit | performance metric —operationalised-as→ machine learning — Audit 2026-09-28: DOUBTFUL - read against its span and kept, but model performance is MEASURED by a metric; operationalised-as runs the wrong way. — “The performance of the ML model in a specific task is measured by a performance metric that is improved with experience over time.” | concept_edges[3] |
| weight | performance metric —operationalised-as→ machine learning — 0.85 — “The performance of the ML model in a specific task is measured by a performance metric that is improved with experience over time.” | concept_edges[3] |
| outcome | control — partial — “The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers.” — “Finally, all articles presented here regard the period from 2004 up to the present.” | controls[0] |
| outcome | control — held — “The presentation of the learning models in ML is limited to the ones that have been implemented in works presented in this review.” | controls[1] |
| limitation | NO INCLUSION CRITERIA ARE GIVEN. Three search engines are named and 40 articles are reported, with no keywords, no screening rule and no count of what was excluded - so the percentages describe a corpus assembled by unstated means — “The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers.” | limitations[0] |
| limitation | journal papers only, which excludes the conference literature where much applied ML appears — “The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers.” | limitations[1] |
| limitation | climate prediction is excluded by declaration rather than by a criterion, on the ground that it is a complete area by itself — “Climate prediction, although very important for agricultural production, has not been included in the presented review, considering the fact that ML applications for climate prediction is a complete area by itself.” | limitations[2] |
| limitation | the ML models described are only those implemented in the reviewed works, so the terminology section is bounded by the sample rather than by the field — “The presentation of the learning models in ML is limited to the ones that have been implemented in works presented in this review.” | limitations[3] |
| limitation | 25 of the 40 articles come from a single journal, Computers and Electronics in Agriculture, and six more from one other - so the sample is concentrated in two venues — “Twenty-five (25) of the presented articles were published in the journal «Computer and Electronics in Agriculture», six were published in the journal of «Biosystems Engineering»” | limitations[4] |
| limitation | the authors state that all reviewed approaches are individual solutions not adequately connected with the decision-making process — “At the moment, all of the approaches regard individual approaches and solutions and are not adequately connected with the decision-making process, as seen in other application domains.” | limitations[5] |
finding · quantity · variable · definition · key-term — grounded in the full text| finding | crop management accounts for 61% of the reviewed ML applications, mostly yield prediction (20%) and disease detection (22%) — “From the above figures and tables, we show that ML models have been applied in multiple applications for crop management (61%); mostly yield prediction (20%) and disease detection (22%).” | content_tags.findings[0] |
| finding | ANNs and SVMs dominate - ANNs in crop, water and soil management, SVMs in livestock — “It is also evident from the analysis that most of the studies used ANN and SVM ML models. More specifically, ANNs were used mostly for implementations in crop, water, and soil management, while SVMs were used mostly for livestock management.” | content_tags.findings[1] |
| finding | ML applications are spread almost equally across livestock (19%), water (10%) and soil management (10%). — “This fact partially explains the almost equal distribution of ML applications in livestock management (19%), water management (10%), and soil management (10%).” | content_tags.findings[2] |
| finding | eight ML models were found across the 40 articles — “From the analysis of these articles, it was found that eight ML models have been implemented in total.” | content_tags.findings[3] |
| quantity | 40 articles in total; 24 crop management, 8 livestock, 4 water, 4 soil — — “Among the articles, eight of them are related to applications of ML in livestock management, four articles are related to applications of ML in water management, four are related to soil management, while the largest number of them (i.e., 24 articles) are related to applications of ML in crop management.” | content_tags.quantities[0] |
| quantity | 25 of 40 from Computers and Electronics in Agriculture, 6 from Biosystems Engineering — — “The number of articles included in this review was 40 in total. Twenty-five (25) of the presented articles were published in the journal «Computer and Electronics in Agriculture», six were published in the journal of «Biosystems Engineering»” | content_tags.quantities[1] |
| quantity | crop 61%, livestock 19%, water 10%, soil 10% — — “This fact partially explains the almost equal distribution of ML applications in livestock management (19%), water management (10%), and soil management (10%).” | content_tags.quantities[2] |
| variable | ML model — “From the analysis of these articles, it was found that eight ML models have been implemented in total.” | content_tags.variables[0] |
| variable | crop management — “The works analyzed were categorized in (a) crop management, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock management, including applications on animal welfare and livestock production; (c) water management; and (d) soil management.” | content_tags.variables[2] |
| variable | livestock management — “The works analyzed were categorized in (a) crop management, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock management, including applications on animal welfare and livestock production; (c) water management; and (d) soil management.” | content_tags.variables[3] |
| variable | water management — “The works analyzed were categorized in (a) crop management, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock management, including applications on animal welfare and livestock production; (c) water management; and (d) soil management.” | content_tags.variables[4] |
| variable | soil management — “The works analyzed were categorized in (a) crop management, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock management, including applications on animal welfare and livestock production; (c) water management; and (d) soil management.” | content_tags.variables[5] |
| definition | machine learning — “Machine Learning Terminology and Definitions Typically, ML methodologies involves a learning process with the objective to learn from “experience” (training data) to perform a task.” | content_tags.definitions[0] |
| definition | feature — “A feature can be nominal (enumeration), binary (i.e., 0 or 1), ordinal (e.g., A+ or B−), or numeric (integer, real number, etc.).” | content_tags.definitions[1] |
| definition | supervised learning — “In supervised learning, data are presented with example inputs and the corresponding outputs, and the objective is to construct a general rule that maps inputs to outputs.” | content_tags.definitions[2] |
| definition | unsupervised learning — “In unsupervised learning, however, there is no distinction between training and test sets with data being unlabeled. The learner processes input data with the goal of discovering hidden patterns.” | content_tags.definitions[3] |
| definition | dimensionality reduction — “Dimensionality reduction (DR) is an analysis that is executed in both families of supervised and unsupervised learning types, with the aim of providing a more compact, lower-dimensional representation of a dataset to preserve as much information as possible from the original data.” | content_tags.definitions[4] |
| concept | machine learning — “In this paper, we present a comprehensive review of research dedicated to applications of machine learning in agricultural production systems.” | concepts[0] |
| concept | training data — “Typically, ML methodologies involves a learning process with the objective to learn from “experience” (training data) to perform a task.” | concepts[1] |
| concept | features — “Usually, an individual example is described by a set of attributes, also known as features or variables.” | concepts[2] |
| concept | attributes — “Usually, an individual example is described by a set of attributes, also known as features or variables.” | concepts[3] |
| concept | performance metric — “The performance of the ML model in a specific task is measured by a performance metric that is improved with experience over time.” | concepts[4] |
| concept | supervised learning — “In supervised learning, data are presented with example inputs and the corresponding outputs, and the objective is to construct a general rule that maps inputs to outputs.” | concepts[5] |
| concept | unsupervised learning — “In unsupervised learning, however, there is no distinction between training and test sets with data being unlabeled. The learner processes input data with the goal of discovering hidden patterns.” | concepts[6] |
| concept | reinforcement learning — “In some cases, inputs can be only partially available with some of the target outputs missing or given only as feedback to the actions in a dynamic environment (reinforcement learning).” | concepts[7] |
| concept | Dimensionality reduction — “Dimensionality reduction (DR) is an analysis that is executed in both families of supervised and unsupervised learning types, with the aim of providing a more compact, lower-dimensional representation of a dataset to preserve as much information as possible from the original data.” | concepts[8] |
| concept | principal component analysis — “Some of the most common DR algorithms are the following: (i) principal component analysis [22], (ii) partial least squares regression [23], and (iii) linear discriminant analysis” | concepts[9] |
| concept | linear discriminant analysis — “Some of the most common DR algorithms are the following: (i) principal component analysis [22], (ii) partial least squares regression [23], and (iii) linear discriminant analysis” | concepts[10] |
| concept | crop management — “The works analyzed were categorized in (a) crop management, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock management, including applications on animal welfare and livestock production; (c) water management; and (d) soil management.” | concepts[11] |
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# Abstract Machine learningterm·dom has emerged with big data technologies and high-performance computing to create new opportunities for data intensive science in the multi-disciplinary agri-technologies domain. In this paper, we present a comprehensive reviewterm·mth of research dedicated to applications of machine learningterm·dom in agricultural production systems. The works analyzed were categorized in (a) crop managementterm·dom, including applications on yield prediction, disease detection, weed detection crop quality, and species recognition; (b) livestock managementterm·var, including applications on animal welfare and livestock production; (c) water managementterm·var; and (d) soil managementterm·var. The filtering and classification of the presented articles demonstrate how agriculture will benefit from machine learningterm·dom technologies. By applying machine learningterm·dom to sensor data, farm management systems are evolving into real time artificial intelligence enabled programs that provide rich recommendations and insights for farmer decision support and action.
Keywords: crop managementterm·dom; water managementterm·var; soil managementterm·var; livestock managementterm·var; artificial intelligence; planning; precision agriculture 1. Introduction Agriculture plays a critical role in the global economy. Pressure on the agricultural system will increase with the continuing expansion of the human population. Agri-technology and precision farming, now also termed digital agriculture, have arisen as new scientific fields that use data intense approaches to drive agricultural productivity while minimizing its environmental impact. The data generated in modern agricultural operations is provided by a variety of different sensors that enable a better understanding of the operational environment (an interaction of dynamic crop, soil, and weather conditions) and the operation itself (machinery data), leading to more accurate and faster decision making.
Machine learningterm·dom (ML) has emerged together with big data technologies and high-performance computing to create new opportunities to unravel, quantify, and understand data intensive processes in agricultural operational environments. Among other definitions, ML is defined as the scientific field that gives machines the ability to learn without being strictly programmed [1]. Year by year, ML applies in more and more scientific fields including, for example, bioinformatics [2, 3], biochemistry [4, 5], medicine [6, 7, 8], meteorology [9, 10, 11], economic sciences [12, 13, 14], robotics [15, 16], aquaculture [17, 18], and food security [19, 20], and climatology [21].
In this paper, we present a comprehensive reviewterm·mth of the application of ML in agriculture. A number of relevant papers are presented that emphasise key and unique featuresterm·dom of popular ML modelsterm·var. The structure of the present work is as follows: the ML terminology, definition, learning tasks, and analysis are initially given in Section 2, along with the most popular learning models and algorithms. Section 3 presents the implemented methodology for the collection and categorization of the presented works. Finally, in Section 4, the advantages derived from the implementation of ML in agri-technology are listed, as well as the future expectations in the domain.
Because of the large number of abbreviations used in the relative scientific works, Table 1, Table 2, Table 3 and Table 4 list the abbreviations that appear in this work, categorized to ML modelsterm·var, algorithms, statistical measures, and general abbreviations, respectively.
2. An Overview on Machine Learningterm·dom 2.1. Machine Learningterm·dom Terminology and Definitions Typically, ML methodologies involves a learning process with the objective to learn from “experience” (training dataterm·dom) to perform a task. Data in ML consists of a set of examples. Usually, an individual example is described by a set of attributesterm·dom, also known as featuresterm·dom or variables. A featureterm·def can be nominal (enumeration), binary (i.e., 0 or 1), ordinal (e.g., A+ or B−), or numeric (integer, real number, etc.). The performance of the ML modelterm·var in a specific task is measured by a performance metricterm·mth that is improved with experience over time. To calculate the performance of ML modelsterm·var and algorithms, various statistical and mathematical models are used. After the end of the learning process, the trained model can be used to classify, predict, or cluster new examples (testing data) using the experience obtained during the training process. Figure 1 shows a typical ML approach.
ML tasks are typically classified into different broad categories depending on the learning type (supervised/unsupervised), learning models (classification, regression, clustering, and dimensionality reductionterm·mth), or the learning models employed to implement the selected task.
2.2. Tasks of Learning ML tasks are classified into two main categories, that is, supervised and unsupervised learningterm·dom, depending on the learning signal of the learning system. In supervised learningterm·dom, data are presented with example inputs and the corresponding outputs, and the objective is to construct a general rule that maps inputs to outputs. In some cases, inputs can be only partially available with some of the target outputs missing or given only as feedback to the actions in a dynamic environment (reinforcement learningterm·dom). In the supervised setting, the acquired expertise (trained model) is used to predict the missing outputs (labels) for the test data. In unsupervised learningterm·dom, however, there is no distinction between training and test sets with data being unlabeled. The learner processes input data with the goal of discovering hidden patterns.
2.3. Analysis of Learning Dimensionality reductionterm·mth (DR) is an analysis that is executed in both families of supervised and unsupervised learningterm·dom types, with the aim of providing a more compact, lower-dimensional representation of a dataset to preserve as much information as possible from the original data. It is usually performed prior to applying a classification or regression model in order to avoid the effects of dimensionality. Some of the most common DR algorithms are the following: (i) principal component analysisterm·mth [22], (ii) partial least squares regression [23], and (iii) linear discriminant analysisterm·mth [24].
2.4. Learning Models The presentation of the learning models in ML is limited to the ones that have been implemented in works presented in this reviewterm·mth.
2.4.1. Regression Regression constitutes a supervised learningterm·dom model, which aims to provide the prediction of an output variable according to the input variables, which are known. Most known algorithms include linear regression and logistic regression [25], as well as stepwise regression [26]. Also, more complex regression algorithms have been developed, such as ordinary least squares regression [27], multivariate adaptive regression splines [28], multiple linear regression, cubist [29], and locally estimated scatterplot smoothing [30].
2.4.2. Clustering Clustering [31] is a typical application of unsupervised learningterm·dom model, typically used to find natural groupings of data (clusters). Well established clustering techniques are the k-means technique [32], the hierarchical technique [33], and the expectation maximisation technique [34].
2.4.3. Bayesian Models Bayesian models (BM) are a family of probabilistic graphical models in which the analysis is undertaken within the context of Bayesian inference. This type of model belongs to the supervised learningterm·dom category and can be employed for solving either classification or regression problems. Naive bayes [35], gaussian naive bayes, multinomial naive bayes, bayesian network [36], mixture of gaussians [37], and bayesian belief network [38] are some of the most prominent algorithms in the literature.
2.4.4. Instance Based Models Instance based models (IBM) are memory-based models that learn by comparing new examples with instances in the training database. They construct hypotheses directly from the data available, while they do not maintain a set of abstractions, and generate classification or regression predictions using only specific instances. The disadvantage of these models is that their complexity grows with data. The most common learning algorithms in this category are the k-nearest neighbor [39], locally weighted learning [40], and learning vector quantization [41].
2.4.5. Decision Trees Decision trees (DT) are classification or regression models formulated in a tree-like architecture [42]. With DT, the dataset is progressively organized in smaller homogeneous subsets (sub-populations), while at the same time, an associated tree graph is generated. Each internal node of the tree structure represents a different pairwise comparison on a selected featureterm·def, whereas each branch represents the outcome of this comparison. Leaf nodes represent the final decision or prediction taken after following the path from root to leaf (expressed as a classification rule). The most common learning algorithms in this category are the classification and regression trees [43], the chi-square automatic interaction detector [44], and the iterative dichotomiser [45].
2.4.6. Artificial Neural Networks Artificial neural networks (ANNs) are divided into two categories; “Traditional ANNs” and “Deep ANNs”.
ANNs are inspired by the human brain functionality, emulating complex functions such as pattern generation, cognition, learning, and decision making [46]. The human brain consists of billions of neurons that inter-communicate and process any information provided. Similarly, an ANN as a simplified model of the structure of the biological neural network, consists of interconnected processing units organized in a specific topology. A number of nodes are arranged in multiple layers including the following: - An input layer where the data is fed into the system, - One or more hidden layers where the learning takes place, and - An output layer where the decision/prediction is given.
ANNs are supervised models that are typically used for regression and classification problems. The learning algorithms commonly used in ANNs include the radial basis function networks [47], perceptron algorithms [48], back-propagation [49], and resilient back-propagation [50]. Also, a large number of ANN-based learning algorithms have been reported, such as counter propagation algorithms [51], adaptive-neuro fuzzy inference systems [52], autoencoder, XY-Fusion, and supervised Kohonen networks [53], as well as Hopfield networks [54], multilayer perceptron [55], self-organising maps [56], extreme learning machines [57], generalized regression neural network [58], ensemble neural networks or ensemble averaging, and self-adaptive evolutionary extreme learning machines [59].
Deep ANNs are most widely referred to as deep learning (DL) or deep neural networks (DNNs) [60]. They are a relatively new area of ML research allowing computational models that are composed of multiple processing layers to learn complex data representations using multiple levels of abstraction. One of the main advantages of DL is that in some cases, the step of featureterm·def extraction is performed by the model itself. DL models have dramatically improved the state-of-the-art in many different sectors and industries, including agriculture. DNN’s are simply an ANN with multiple hidden layers between the input and output layers and can be either supervised, partially supervised, or even unsupervised. A common DL model is the convolutional neural network (CNN), where featureterm·def maps are extracted by performing convolutions in the image domain. A comprehensive introduction on CNNs is given in the literature [61]. Other typical DL architectures include deep Boltzmann machine, deep belief network [62], and auto-encoders [63].
2.4.7. Support Vector Machines Support vector machines (SVMs) were first introduced in the work of [64] on the foundation of statistical learning theory. SVM is intrinsically a binary classifier that constructs a linear separating hyperplane to classify data instances. The classification capabilities of traditional SVMs can be substantially enhanced through transformation of the original featureterm·def space into a featureterm·def space of a higher dimension by using the “kernel trick”. SVMs have been used for classification, regression, and clustering. Based on global optimization, SVMs deal with overfitting problems, which appear in high-dimensional spaces, making them appealing in various applications [65, 66]. Most used SVM algorithms include the support vector regression [67], least squares support vector machine [68], and successive projection algorithm-support vector machine [69].
2.4.8. Ensemble Learning Ensemble learning (EL) models aim at improving the predictive performance of a given statistical learning or model fitting technique by constructing a linear combination of simpler base learner. Considering that each trained ensemble represents a single hypothesis, these multiple-classifier systems enable hybridization of hypotheses not induced by the same base learner, thus yielding better results in the case of significant diversity among the single models. Decision trees have been typically used as the base learner in EL models, for example, random forest [70], whereas a large number of boosting and bagging implementations have been also proposed, for example, boosting technique [71], adaboost [72], and bootstrap aggregating or bagging algorithm [73].
3. Reviewterm·mth The reviewed articles have been, on a first level, classified in four generic categories; namely, crop managementterm·dom, livestock managementterm·var, water managementterm·var, and soil managementterm·var. The applications of ML in the crop section were divided into sub-categories including yield prediction, disease detection, weed detection crop quality, and species recognition. The applications of ML in the livestock section were divided into two sub-categories; animal welfare and livestock production.
The search engines implemented were Scopus, ScienceDirect and PubMed. The selected articles regard works presented solely in journal papers. Climate prediction, although very important for agricultural production, has not been included in the presented reviewterm·mth, considering the fact that ML applications for climate prediction is a complete area by itself. Finally, all articles presented here regard the period from 2004 up to the present.
3.1. Crop Managementterm·dom 3.1.1. Yield Prediction Yield prediction, one of the most significant topics in precision agriculture, is of high importance for yield mapping, yield estimation, matching of crop supply with demand, and crop managementterm·dom to increase productivity. Examples of ML applications include in those in the works of [74]; an efficient, low-cost, and non-destructive method that automatically counted coffee fruits on a branch. The method calculates the coffee fruits in three categories: harvestable, not harvestable, and fruits with disregarded maturation stage. In addition, the method estimated the weight and the maturation percentage of the coffee fruits. The aim of this work was to provide information to coffee growers to optimise economic benefits and plan their agricultural work. Another study that used for yield prediction is that by the authors of [75], in which they developed a machine vision system for automating shaking and catching cherries during harvest. The system segments and detects occluded cherry branches with full foliage even when these are inconspicuous. The main aim of the system was to reduce labor requirements in manual harvesting and handling operations. In another study [76], authors developed an early yield mapping system for the identification of immature green citrus in a citrus grove under outdoor conditions. As all other relative studies, the aim of the study was to provide growers with yield-specific information to assist them to optimise their grove in terms of profit and increased yield. In another study [77], the authors developed a model for the estimation of grassland biomass (kg dry matter/ha/day) based on ANNs and multitemporal remote sensing data. Another study dedicated to yield prediction, and specifically to wheat yield prediction, was presented in another study [78]. The developed method used satellite imagery and received crop growth characteristics fused with soil data for a more accurate prediction. The authors of [79] presented a method for the detection of tomatoes based on EM and remotely sensed red green blue (RGB) images, which were captured by an unmanned aerial vehicle (UAV). Also, in the work of [80], authors developed a method for the rice development stage prediction based on SVM and basic geographic information obtained from weather stations in China. Finally, a generalized method for agricultural yield predictions, was presented in another study [81]. The method is based on an ENN application on long-period generated agronomical data (1997–2014). The study regards regional predictions (specifically in in Taiwan) focused on the supporting farmers to avoid imbalances in market supply and demand caused or hastened by harvest crop quality.
Table 5 summarizes the above papers for the case of yield prediction sub-category.
3.1.2. Disease Detection Disease detection and yield prediction are the sub-categories with the higher number of articles presented in this reviewterm·mth. One of the most significant concerns in agriculture is pest and disease control in open-air (arable farming) and greenhouse conditions. The most widely used practice in pest and disease control is to uniformly spray pesticides over the cropping area. This practice, although effective, has a high financial and significant environmental cost. Environmental impacts can be residues in crop products, side effects on ground water contamination, impacts on local wildlife and eco-systems, and so on. ML is an integrated part of precision agriculture management, where agro-chemicals input is targeted in terms of time and place. In the literature [82], a tool is presented for the detection and discrimination of healthy Silybum marianum plants and those infected by smut fungus Microbotyum silybum during vegetative growth. In the work of [83], authors developed a new method based on image processing procedure for the classification of parasites and the automatic detection of thrips in strawberry greenhouse environment, for real-time control. The authos of [84] presented a method for detection and screening of Bakanae disease in rice seedlings. More specifically, the aim of the study was the accurate detection of pathogen Fusarium fujikuroi for two rice cultivars. The automated detection of infected plants increased grain yield and was less time-consuming compared with naked eye examination.
Wheat is one of the most economically significant crops worldwide. The last five studies presented in this sub-category are dedicated to the detection and discrimination between diseased and healthy wheat crops. The authors of [85] developed a new system for the detection of nitrogen stressed, and yellow rust infected and healthy winter wheat canopies based on hierarchical self-organizing classifier and hyperspectral reflectance imaging data. The study aimed at the accurate detection of these categories for a more effective usage of fungicides and fertilizers according to the plant’s needs. In the next case study [86], the development of a system was presented that automatically discriminated between water stressed Septoria tritici infected and healthy winter wheat canopies. The approach used an least squares (LS)-SVM classifier with optical multisensor fusion. The authors of [87] presented a method to detect either yellow rust infected or healthy wheat, based on ANN models and spectral reflectance featuresterm·dom. The accurate detection of either infected or healthy plants enables the precise targeting of pesticides in the field. In the work of [88], a real time remote sensing system is presented for the detection of yellow rust infected and healthy wheat. The system is based on a self-organising map (SOM) neural network and data fusion of hyper-spectral reflection and multi-spectral fluorescence imaging. The goal of the study was the accurate detection, before it can visibly detected, of yellow rust infected winter wheat cultivar “Madrigal”. Finally, the authors of [89] presented a method for the simultaneous identification and discrimination of yellow rust infected, and nitrogen stressed and healthy wheat plants of cultivar “Madrigal”. The approach is based on an SOM neural network and hyperspectral reflectance imaging. The aim of the study was the accurate discrimination between the plant stress, which is caused by disease and nutrient deficiency stress under field conditions. Finally, the author of [90] presented a CNN-based method for the disease detection diagnosis based on simple leaves images with sufficient accuracy to classify between healthy and diseased leaves in various plants.
Table 6 summarizes the above papers for the case of the disease detection sub-category.
3.1.3. Weed Detection Weed detection and management is another significant problem in agriculture. Many producers indicate weeds as the most important threat to crop production. The accurate detection of weeds is of high importance to sustainable agriculture, because weeds are difficult to detect and discriminate from crops. Again, ML algorithms in conjunction with sensors can lead to accurate detection and discrimination of weeds with low cost and with no environmental issues and side effects. ML for weed detection can enable the development of tools and robots to destroy weeds, which minimise the need for herbicides. Two studies on ML applications for weed detection issues in agriculture have been presented. In the first study [91], authors presented a new method based on counter propagation (CP)-ANN and multispectral images captured by unmanned aircraft systems (UAS) for the identification of Silybum marianum, a weed that is hard to eradicate and causes major loss on crop yield. In the second study [92], the authors developed a new method based on ML techniques and hyperspectral imaging, for crop and weed species recognition. More specifically, the authors created an active learning system for the recognition of Maize (Zea mayas), as crop plant species and Ranunculus repens, Cirsium arvense, Sinapis arvensis, Stellaria media, Tarraxacum officinale, Poa annua, Polygonum persicaria, Urtica dioica, Oxalis europaea, and Medicago lupulina as weed species. The main goal was the accurate recognition and discrimination of these species for economic and environmental purposes. In another study [93], the authors developed a weed detection method based on SVN in grassland cropping.
Table 7 summarizes the above papers for the case of weed detection sub-category.
3.1.4. Crop Quality The penultimate sub-category for the crop category is studies developed for the identification of featuresterm·dom connected with the crop quality. The accurate detection and classification of crop quality characteristics can increase product price and reduce waste. In the first study [94], the authors presented and developed a new method for the detection and classification of botanical and non-botanical foreign matter embedded inside cotton lint during harvesting. The aim of the study was quality improvement while the minimising fiber damage. Another study [95] regards pears production and, more specifically, a method was presented for the identification and differentiation of Korla fragrant pears into deciduous-calyx or persistent-calyx categories. The approach applied ML methods with hyperspectral reflectance imaging. The final study for this sub-category was by the authors of [96], in which a method was presented for the prediction and classification of the geographical origin for rice samples. The method was based on ML techniques applied on chemical components of samples. More specifically, the main goal was the classification of the geographical origin of rice, for two different climate regions in Brazil; Goias and Rio Grande do Sul. The results showed that Cd, Rb, Mg, and K are the four most relevant chemical components for the classification of samples.
Table 8 summarizes the above presented articles.
3.1.5. Species Recognition The last sub-category of crop category is the species recognition. The main goal is the automatic identification and classification of plant species in order to avoid the use of human experts, as well as to reduce the classification time. A method for the identification and classification of three legume species, namely, white beans, red beans, and soybean, via leaf vein patterns has been presented in [97]. Vein morphology carries accurate information about the properties of the leaf. It is an ideal tool for plant identification in comparison with color and shape.
Table 9 summarizes the above study for the case of species recognition sub-category.
3.2. Livestock Managementterm·var The livestock category consists of two sub-categories, namely, animal welfare and livestock production. Animal welfare deals with the health and wellbeing of animals, with the main application of ML in monitoring animal behaviour for the early detection of diseases. On the other hand, livestock production deals with issues in the production system, where the main scope of ML applications is the accurate estimation of economic balances for the producers based on production line monitoring.
3.2.1. Animal Welfare Several articles are reported to belong to the animal welfare sub-category. In the first article [98], a method is presented for the classification of cattle behaviour based on ML modelsterm·var using data collected by collar sensors with magnetometers and three-axis accelerometers. The aim of the study was the prediction of events such as the oestrus and the recognition of dietary changes on cattle. In the second article [99], a system was presented for the automatic identification and classification of chewing patterns in calves. The authors created a system based on ML applying data from chewing signals of dietary supplements, such as hay and ryegrass, combined with behaviour data, such as rumination and idleness. Data was collected by optical FBG sensors. In another study [100], an automated monitoring system based on ML was presented for animal behavior tracking, including tracking of animal movements by depth video cameras, for monitoring various activities of the animal (standing, moving, feeding, and drinking).
Table 10 summarizes the featuresterm·dom of the above presented articles.
3.2.2. Livestock Production The sub-category of livestock production regards studies developed for the accurate prediction and estimation of farming parameters to optimize the economic efficiency of the production system. This sub-category consists of the presentation of four articles, three with cattle production and one for hens’ eggs production. In the work of [101], a method for the prediction of the rumen fermentation pattern from milk fatty acids was presented. The main aim of the study was to achieve the most accurate prediction of rumen fermentations, which play a significant role for the evaluation of diets for milk production. In addition, this work showed that milk fatty acids have ideal featuresterm·dom to predict the molar proportions of volatile fatty acids in the rumen. The next study [102] was related to hen production. Specifically, a method based on SVM model was presented for the early detection and warning of problems in the commercial production of eggs. Based on SVM methods [103], a method for the accurate estimation of bovine weight trajectories over time was presented. The accurate estimation of cattle weights is very important for breeders. The last article of the section [104] deals with the development of a function for the prediction of carcass weight for beef cattle of the Asturiana de los Valles breed based on SVR models and zoometric measurements featuresterm·dom. The results show that the presented method can predict carcass weights 150 days prior to the slaughter day. The authors of [105] presented a method based on convolutional neural networks (CNNs) applied in digital images for pig face recognition. The main aim of the research was the identification of animals without the need for radio frequency identification (RFID) tags, which involve a distressing activity for the animal, are limited in their range, and are a time-consuming method.
Table 11 summarizes the featuresterm·dom of the above presented works.
3.3. Water Managementterm·var Water managementterm·var in agricultural production requires significant efforts and plays a significant role in hydrological, climatological, and agronomical balance.
This section consists of four studies that were mostly developed for the estimation of daily, weekly, or monthly evapotranspiration. The accurate estimation of evapotranspiration is a complex process and is of a high importance for resource management in crop production, as well as for the design and the operation management of irrigation systems. In another study [106], the authors developed a computational method for the estimation of monthly mean evapotranspiration for arid and semi-arid regions. It used monthly mean climatic data of 44 meteorological stations for the period 1951–2010. In another study dedicated to ML applications on agricultural water managementterm·var [107], two scenarios were presented for the estimation of the daily evapotranspiration from temperature data collected from six meteorological stations of a region during the long period (i.e., 1961–2014). Finally, in another study [108], authors developed a method based on ELM model fed with temperature data for the weekly estimation of evapotranspiration for two meteorological weather stations. The purpose was the accurate estimation of weekly evapotranspiration in arid regions of India based on limited data scenario for crop water managementterm·var.
Daily dew point temperature, on the other hand, is a significant element for the identification of expected weather phenomena, as well as for the estimation of evapotranspiration and evaporation. In another article [109], a model is presented for the prediction of daily dew point temperature, based on ML. The weather data were collected from two different weather stations.
Table 12 summarizes the above papers for the case of the water managementterm·var sub-category.
3.4. Soil Managementterm·var The final category of this reviewterm·mth concerns ML application on prediction-identification of agricultural soil properties, such as the estimation of soil drying, condition, temperature, and moisture content. Soil is a heterogeneous natural resource, with complex processes and mechanisms that are difficult to understand. Soil properties allow researchers to understand the dynamics of ecosystems and the impingement in agriculture. The accurate estimation of soil conditions can lead to improved soil managementterm·var. Soil temperature alone plays a significant role for the accurate analysis of the climate change effects of a region and eco-environmental conditions. It is a significant meteorological parameter controlling the interactive processes between ground and atmosphere. In addition, soil moisture has an important role for crop yield variability. However, soil measurements are generally time-consuming and expensive, so a low cost and reliable solution for the accurate estimation of soil can be achieved with the usage of computational analysis based on ML techniques. The first study for this last sub-category is the work of [110]. More specifically, this study presented a method for the evaluation of soil drying for agricultural planning. The method accurately evaluates the soil drying, with evapotranspiration and precipitation data, in a region located in Urbana, IL of the United States. The goal of this method was the provision of remote agricultural management decisions. The second study [111] was developed for the prediction of soil condition. In particular, the study presented the comparison of four regression models for the prediction of soil organic carbon (OC), moisture content (MC), and total nitrogen (TN). More specifically, the authors used a visible-near infrared (VIS-NIR) spectrophotometer to collect soil spectra from 140 unprocessed and wet samples of the top layer of Luvisol soil types. The samples were collected from an arable field in Premslin, Germany in August 2013, after the harvest of wheat crops. They concluded that the accurate prediction of soil properties can optimize soil managementterm·var. In a third study [112], the authors developed a new method based on a self adaptive evolutionary-extreme learning machine (SaE-ELM) model and daily weather data for the estimation of daily soil temperature at six different depths of 5, 10, 20, 30, 50, and 100 cm in two different in climate conditions regions of Iran; Bandar Abbas and Kerman. The aim was the accurate estimation of soil temperature for agricultural management. The last study [113] presented a novel method for the estimation of soil moisture, based on ANN models using data from force sensors on a no-till chisel opener.
Table 13 summarizes the above papers for the case of soil managementterm·var sub-category.
4. Discussion and Conclusions The number of articles included in this reviewterm·mth was 40 in total. Twenty-five (25) of the presented articles were published in the journal «Computer and Electronics in Agriculture», six were published in the journal of «Biosystems Engineering», and the rest of the articles were published to the following journals: «Sensors», «Sustainability», «Real-Time Imagining», «Precision Agriculture», «Earth Observations and Remote Sensing», «Saudi Journal of Biological Sciences», «Scientific Reports», and «Computers in Industry». Among the articles, eight of them are related to applications of ML in livestock managementterm·var, four articles are related to applications of ML in water managementterm·var, four are related to soil managementterm·var, while the largest number of them (i.e., 24 articles) are related to applications of ML in crop managementterm·dom. Figure 2 presents the distribution of the articles according to these application domains and to the defined sub-categories.
From the analysis of these articles, it was found that eight ML modelsterm·var have been implemented in total. More specifically, five ML modelsterm·var were implemented in the approaches on crop managementterm·dom, where the most popular models were ANNs (with most frequent crop at hand—wheat). In livestock managementterm·var category, four ML modelsterm·var were implemented, with most popular models being SVMs (most frequent livestock type at hand—cattle). For water managementterm·var in particular evapotranspiration estimation, two ML modelsterm·var were implemented and the most frequently implemented were ANNs. Finally, in the soil managementterm·var category, four ML modelsterm·var were implemented, with the most popular one again being the ANN model. In Figure 3, the eight ML modelsterm·var with their total rates are presented, and in Figure 4 and Table 14, the ML modelsterm·var for all studies according to the sub-category are presented. Finally, in Figure 5 and Table 15, the future techniques that were used according to each sub-category are presented (it is noting that the figure and table provide the same information in different demonstration purposes).
From the above figures and tables, we show that ML modelsterm·var have been applied in multiple applications for crop managementterm·dom (61%); mostly yield prediction (20%) and disease detection (22%). This trend in the applications distribution reflects the data intense applications within crop and high use of images (spectral, hyperspectral, NIR, etc.). Data analysis, as a mature scientific field, provides the ground for the development of numerous applications related to crop managementterm·dom because, in most cases, ML-based predictions can be extracted without the need for fusion of data from other resources. In contrast, when data recordings are involved, occasionally at the level of big data, the implementations of ML are less in number, mainly because of the increased efforts required for the data analysis task and not for the ML modelsterm·var per se. This fact partially explains the almost equal distribution of ML applications in livestock managementterm·var (19%), water managementterm·var (10%), and soil managementterm·var (10%). It is also evident from the analysis that most of the studies used ANN and SVM ML modelsterm·var. More specifically, ANNs were used mostly for implementations in crop, water, and soil managementterm·var, while SVMs were used mostly for livestock managementterm·var.
By applying machine learningterm·dom to sensor data, farm management systems are evolving into real artificial intelligence systems, providing richer recommendations and insights for the subsequent decisions and actions with the ultimate scope of production improvement. For this scope, in the future, it is expected that the usage of ML modelsterm·var will be even more widespread, allowing for the possibility of integrated and applicable tools. At the moment, all of the approaches regard individual approaches and solutions and are not adequately connected with the decision-making process, as seen in other application domains. This integration of automated data recording, data analysis, ML implementation, and decision-making or support will provide practical tolls that come in line with the so-called knowledge-based agriculture for increasing production levels and bio-products quality.
Author Contributions Writing-Original Draft Preparation, K.G.L., D.B. and P.B.; Methodology, D.M., S.P. and P.B.; Investigation, K.G.L. and D.M.; Conceptualization D.B. and D.M.; Writing-Review & Editing, S.P.; Supervision, D.B.
Funding This reviewterm·mth work was partly supported by the project “Research Synergy to address major challenges in the nexus: energy–environment–agricultural production (Food, Water, Materials)”—NEXUS, funded by the Greek Secretariat for Research and Technology (GSRT)—Pr. No. MIS 5002496.
Conflicts of Interest The authors declare no conflict of interest.